BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E03SP1|AL430397
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig720 1213 0.0
3x_Contig1278 531 e-151
>3x_Contig720
Length = 2178
Score = 1213 bits (612), Expect = 0.0
Identities = 626/628 (99%), Gaps = 2/628 (0%)
Strand = Plus / Plus
Query: 1 atcaacacactaagaatggaaagagctccaaatataaaaccacccacggcttaaccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 atcaacacactaagaatggaaagagctccaaatataaaaccacccacggcttaaccaaaa 1611
Query: 61 caatacatgttactgaattcttttctgtaccaataaggcaaatgtttcccccaacacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 caatacatgttactgaattcttttctgtaccaataaggcaaatgtttcccccaacacttc 1671
Query: 121 gcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtcccagcaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 gcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtcccagcaacatt 1731
Query: 181 taaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaatctagaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 taaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaatctagaact 1791
Query: 241 aaaagttactgctgaactggtctttcttggaagaagaacactcacaaactgagtagtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 aaaagttactgctgaactggtctttcttggaagaagaacactcacaaactgagtagtgca 1851
Query: 301 ggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagcaaacagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 ggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagcaaacagatg 1911
Query: 361 aacaccttccatctacactaaggtacatcgcatattcccgtattttcaaacaatttccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1912 aacaccttccatctacactaaggtacatcgcatattcccgtattttcaaacaatttccca 1971
Query: 421 aatcgcttctcgttttccgttttgctaaccccagcagtatgcggnttattgtgtcgatct 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1972 aatcgcttctcgttttccgttttgctaaccccagcagtatgcgg-ttattgtgtcgatct 2030
Query: 481 ggtccttcttgtgccttttttttttgtttacctttccagctactggagtttctgagcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 ggtccttcttgtgccttttttttttgtttacctttccagctactggagtttctgagcttt 2090
Query: 541 gcaggctccaaaatggcatccttctgaaccgacgtacacgtgcttc-tatttccgtctta 599
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2091 gcaggctccaaaatggcatccttctgaaccgacgtacacgtgcttcttatttccgtctta 2150
Query: 600 tagagtttcgaaaccctgccgagcaaaa 627
||||||||||||||||||||||||||||
Sbjct: 2151 tagagtttcgaaaccctgccgagcaaaa 2178
>3x_Contig1278
Length = 6932
Score = 531 bits (268), Expect = e-151
Identities = 282/284 (99%), Gaps = 2/284 (0%)
Strand = Plus / Minus
Query: 594 gtcttatagagtttcgaaaccctgccgagcaaaagaaacaaagccaaagaaaactacatg 653
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6911 gtcttatagagtt-cgaaacc-tgccgagcaaaagaaacaaagccaaagaaaactacatg 6854
Query: 654 acaggatgacgtcttttggaaattcaccaatggggttttctcagaaaaccctatcgttta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6853 acaggatgacgtcttttggaaattcaccaatggggttttctcagaaaaccctatcgttta 6794
Query: 714 tgctcgcaaagaaaaaggaaaaacacattgaaaagggaatgttaaaaaaatagagtgaaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6793 tgctcgcaaagaaaaaggaaaaacacattgaaaagggaatgttaaaaaaatagagtgaaa 6734
Query: 774 acaggaatggtactgacgttacagtggtttcagcagaaaaaacactggcaatagggttcg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6733 acaggaatggtactgacgttacagtggtttcagcagaaaaaacactggcaatagggttcg 6674
Query: 834 tattttacatttgacaacacagtttgagaatgatacgtagcgga 877
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6673 tattttacatttgacaacacagtttgagaatgatacgtagcgga 6630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8120
Number of Sequences: 1807
Number of extensions: 8120
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 2
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)